Integrated Genomic Surveillance Platform

Real-time SARS-CoV-2 viral lineage classification powered by Pangolin, Nextclade, UShER, and ML-enhanced error detection

Upload & Analyze

Drag & drop FASTA files or paste sequences directly

  • ✓ Single or batch processing
  • ✓ Real-time progress tracking
  • ✓ Automated validation

Multi-Tool Analysis

Integrated Pangolin, Nextclade, UShER, Scorpio

  • ✓ Parallel execution
  • ✓ Consensus aggregation
  • ✓ Quality control checks

ML Error Detection

AI-powered confidence adjustment and anomaly detection

  • ✓ FASTER-NN CNN analysis
  • ✓ TabNet metadata quality
  • ✓ LLM contextual review

Interactive Viz

Rich visualizations and phylogenetic trees

  • ✓ D3.js tree viewer
  • ✓ Geographic mapping
  • ✓ Export to CSV/JSON
<30s
Analysis Time (p95)
>99.5%
Accuracy Rate
1,000+
Sequences/Minute
5
Integrated Tools